WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54E2A.11.2 Sequence Name  Y54E2A.11.2
Length (nt)  2589   Chromosome Location  II: 14795410-14798235
Chromosome . Primary Identifier  II Chromosome Location . Start  14795410
Chromosome Location . End  14798235 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54E2A.11.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001225 eif-3.B Y54E2A.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54E2A.11 Y54E2A.11 2178   II: 14795429-14795510

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y54E2A.11.2 14795410 14798235 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon76032   101   II: 14795410-14795510 Caenorhabditis elegans
Exon76034   194   II: 14795580-14795773 Caenorhabditis elegans
Exon76036   333   II: 14795819-14796151 Caenorhabditis elegans
Exon76038   708   II: 14796205-14796912 Caenorhabditis elegans
Exon76040   1253   II: 14796983-14798235 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y54E2A.11.2 14795410 14798235 1

1 Sequence

Length
2589

1 Sequence Ontology Term

Identifier Name Description
transcript