WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R05H10.3a.1 Sequence Name  R05H10.3a.1
Length (nt)  2079   Chromosome Location  II: 14869944-14883054
Chromosome . Primary Identifier  II Chromosome Location . Start  14869944
Chromosome Location . End  14883054 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R05H10.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011044 R05H10.3 R05H10.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R05H10.3a R05H10.3a 1776   II: 14869949-14870060

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R05H10.3a.1 14869944 14883054 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon76145   117   II: 14869944-14870060 Caenorhabditis elegans
Exon76148   110   II: 14870698-14870807 Caenorhabditis elegans
Exon76149   151   II: 14870954-14871104 Caenorhabditis elegans
Exon76150   316   II: 14872600-14872915 Caenorhabditis elegans
Exon76152   327   II: 14874592-14874918 Caenorhabditis elegans
Exon76157   269   II: 14879921-14880189 Caenorhabditis elegans
Exon76160   344   II: 14881034-14881377 Caenorhabditis elegans
Exon76163   445   II: 14882610-14883054 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R05H10.3a.1 14869944 14883054 1

1 Sequence

Length
2079

1 Sequence Ontology Term

Identifier Name Description
transcript