WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y53F4A.2.1 Sequence Name  Y53F4A.2.1
Length (nt)  368   Chromosome Location  II: 14876102-14877153
Chromosome . Primary Identifier  II Chromosome Location . Start  14876102
Chromosome Location . End  14877153 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y53F4A.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013148 Y53F4A.2 Y53F4A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y53F4A.2 Y53F4A.2 282   II: 14876147-14876182

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y53F4A.2.1 14876102 14877153 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon76154   81   II: 14876102-14876182 Caenorhabditis elegans
Exon76155   234   II: 14876817-14877050 Caenorhabditis elegans
Exon76156   53   II: 14877101-14877153 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y53F4A.2.1 14876102 14877153 -1

1 Sequence

Length
368

1 Sequence Ontology Term

Identifier Name Description
transcript