WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R03C1.3a Sequence Name  R03C1.3a
Length (nt)  771   Chromosome Location  II: 14902519-14902830
Chromosome . Primary Identifier  II Chromosome Location . Start  14902519
Chromosome Location . End  14902830
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R03C1.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE25964 COG-1, isoform a 28.0 256 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00107689
WBRNAi00051169
WBRNAi00062927
WBRNAi00034550

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R03C1.3a 14902519 14902830 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000584 cog-1 R03C1.3 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:R03C1.3a 14902519 14902830 1
CDS:R03C1.3a 14903131 14903200 1
CDS:R03C1.3a 14904742 14905001 1
CDS:R03C1.3a 14907011 14907139 1

1 Sequence

Length
771

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R03C1.3a.1 R03C1.3a.1 1191   II: 14902493-14907533