WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:E01F3.1b.1 Sequence Name  E01F3.1b.1
Length (nt)  2838   Chromosome Location  II: 14919705-14953349
Chromosome . Primary Identifier  II Chromosome Location . Start  14919705
Chromosome Location . End  14953349 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
E01F3.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008443 pde-3 E01F3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:E01F3.1b E01F3.1b 1878   II: 14924423-14924507

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:E01F3.1b.1 14919705 14953349 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon76192   217   II: 14919705-14919921 Caenorhabditis elegans
Exon76195   91   II: 14924417-14924507 Caenorhabditis elegans
Exon76200   152   II: 14931182-14931333 Caenorhabditis elegans
Exon76205   207   II: 14932999-14933205 Caenorhabditis elegans
Exon76213   101   II: 14945217-14945317 Caenorhabditis elegans
Exon76226   247   II: 14949791-14950037 Caenorhabditis elegans
Exon76236   112   II: 14950100-14950211 Caenorhabditis elegans
Exon76246   257   II: 14950388-14950644 Caenorhabditis elegans
Exon76256   119   II: 14951002-14951120 Caenorhabditis elegans
Exon76266   358   II: 14951188-14951545 Caenorhabditis elegans
Exon76276   136   II: 14951626-14951761 Caenorhabditis elegans
Exon76286   101   II: 14952351-14952451 Caenorhabditis elegans
Exon76298   740   II: 14952610-14953349 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:E01F3.1b.1 14919705 14953349 1

1 Sequence

Length
2838

1 Sequence Ontology Term

Identifier Name Description
transcript