WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:E01F3.1e.1 Sequence Name  E01F3.1e.1
Length (nt)  2037   Chromosome Location  II: 14919769-14952612
Chromosome . Primary Identifier  II Chromosome Location . Start  14919769
Chromosome Location . End  14952612 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
E01F3.1e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008443 pde-3 E01F3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:E01F3.1e E01F3.1e 2037   II: 14919769-14919921

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:E01F3.1e.1 14919769 14952612 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon76193   153   II: 14919769-14919921 Caenorhabditis elegans
Exon76196   91   II: 14924417-14924507 Caenorhabditis elegans
Exon76201   152   II: 14931182-14931333 Caenorhabditis elegans
Exon76206   207   II: 14932999-14933205 Caenorhabditis elegans
Exon76215   101   II: 14945217-14945317 Caenorhabditis elegans
Exon76229   247   II: 14949791-14950037 Caenorhabditis elegans
Exon76239   112   II: 14950100-14950211 Caenorhabditis elegans
Exon76249   257   II: 14950388-14950644 Caenorhabditis elegans
Exon76259   119   II: 14951002-14951120 Caenorhabditis elegans
Exon76269   358   II: 14951188-14951545 Caenorhabditis elegans
Exon76279   136   II: 14951626-14951761 Caenorhabditis elegans
Exon76289   101   II: 14952351-14952451 Caenorhabditis elegans
Exon76295   3   II: 14952610-14952612 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:E01F3.1e.1 14919769 14952612 1

1 Sequence

Length
2037

1 Sequence Ontology Term

Identifier Name Description
transcript