WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:E01F3.1j.1 Sequence Name  E01F3.1j.1
Length (nt)  1923   Chromosome Location  II: 14924423-14953000
Chromosome . Primary Identifier  II Chromosome Location . Start  14924423
Chromosome Location . End  14953000 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
E01F3.1j.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008443 pde-3 E01F3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:E01F3.1j E01F3.1j 1923   II: 14924423-14924507

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:E01F3.1j.1 14924423 14953000 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon76198   85   II: 14924423-14924507 Caenorhabditis elegans
Exon76203   152   II: 14931182-14931333 Caenorhabditis elegans
Exon76210   207   II: 14932999-14933205 Caenorhabditis elegans
Exon76220   101   II: 14945217-14945317 Caenorhabditis elegans
Exon76234   247   II: 14949791-14950037 Caenorhabditis elegans
Exon76244   112   II: 14950100-14950211 Caenorhabditis elegans
Exon76254   257   II: 14950388-14950644 Caenorhabditis elegans
Exon76264   119   II: 14951002-14951120 Caenorhabditis elegans
Exon76274   358   II: 14951188-14951545 Caenorhabditis elegans
Exon76284   136   II: 14951626-14951761 Caenorhabditis elegans
Exon76294   101   II: 14952351-14952451 Caenorhabditis elegans
Exon76301   48   II: 14952953-14953000 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:E01F3.1j.1 14924423 14953000 1

1 Sequence

Length
1923

1 Sequence Ontology Term

Identifier Name Description
transcript