WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:E01F3.1g.1 Sequence Name  E01F3.1g.1
Length (nt)  2132   Chromosome Location  II: 14931179-14953291
Chromosome . Primary Identifier  II Chromosome Location . Start  14931179
Chromosome Location . End  14953291 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
E01F3.1g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008443 pde-3 E01F3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:E01F3.1g E01F3.1g 1782   II: 14931238-14931333

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:E01F3.1g.1 14931179 14953291 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon76199   155   II: 14931179-14931333 Caenorhabditis elegans
Exon76208   207   II: 14932999-14933205 Caenorhabditis elegans
Exon76217   101   II: 14945217-14945317 Caenorhabditis elegans
Exon76231   247   II: 14949791-14950037 Caenorhabditis elegans
Exon76241   112   II: 14950100-14950211 Caenorhabditis elegans
Exon76251   257   II: 14950388-14950644 Caenorhabditis elegans
Exon76261   119   II: 14951002-14951120 Caenorhabditis elegans
Exon76271   358   II: 14951188-14951545 Caenorhabditis elegans
Exon76281   136   II: 14951626-14951761 Caenorhabditis elegans
Exon76291   101   II: 14952351-14952451 Caenorhabditis elegans
Exon76302   339   II: 14952953-14953291 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:E01F3.1g.1 14931179 14953291 1

1 Sequence

Length
2132

1 Sequence Ontology Term

Identifier Name Description
transcript