WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:E01F3.1c.1 Sequence Name  E01F3.1c.1
Length (nt)  2199   Chromosome Location  II: 14944289-14953353
Chromosome . Primary Identifier  II Chromosome Location . Start  14944289
Chromosome Location . End  14953353 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
E01F3.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008443 pde-3 E01F3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:E01F3.1c E01F3.1c 1770   II: 14944365-14944655

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:E01F3.1c.1 14944289 14953353 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon76212   367   II: 14944289-14944655 Caenorhabditis elegans
Exon76214   101   II: 14945217-14945317 Caenorhabditis elegans
Exon76227   247   II: 14949791-14950037 Caenorhabditis elegans
Exon76237   112   II: 14950100-14950211 Caenorhabditis elegans
Exon76247   257   II: 14950388-14950644 Caenorhabditis elegans
Exon76257   119   II: 14951002-14951120 Caenorhabditis elegans
Exon76267   358   II: 14951188-14951545 Caenorhabditis elegans
Exon76277   136   II: 14951626-14951761 Caenorhabditis elegans
Exon76287   101   II: 14952351-14952451 Caenorhabditis elegans
Exon76304   401   II: 14952953-14953353 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:E01F3.1c.1 14944289 14953353 1

1 Sequence

Length
2199

1 Sequence Ontology Term

Identifier Name Description
transcript