WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y53F4B.4b.1 Sequence Name  Y53F4B.4b.1
Length (nt)  1320   Chromosome Location  II: 14969648-14976898
Chromosome . Primary Identifier  II Chromosome Location . Start  14969648
Chromosome Location . End  14976898 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y53F4B.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013151 nsun-5 Y53F4B.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y53F4B.4b Y53F4B.4b 1320   II: 14969648-14969749

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y53F4B.4b.1 14969648 14976898 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon76327   102   II: 14969648-14969749 Caenorhabditis elegans
Exon76332   303   II: 14972149-14972451 Caenorhabditis elegans
Exon76337   258   II: 14973396-14973653 Caenorhabditis elegans
Exon76342   116   II: 14974485-14974600 Caenorhabditis elegans
Exon76347   139   II: 14974786-14974924 Caenorhabditis elegans
Exon76352   117   II: 14975702-14975818 Caenorhabditis elegans
Exon76354   285   II: 14976614-14976898 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y53F4B.4b.1 14969648 14976898 1

1 Sequence

Length
1320

1 Sequence Ontology Term

Identifier Name Description
transcript