WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y53F4B.43.1 Sequence Name  Y53F4B.43.1
Length (nt)  826   Chromosome Location  II: 14988471-14992634
Chromosome . Primary Identifier  II Chromosome Location . Start  14988471
Chromosome Location . End  14992634 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y53F4B.43.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044726 Y53F4B.43 Y53F4B.43 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y53F4B.43 Y53F4B.43 366   II: 14988531-14988563

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y53F4B.43.1 14988471 14992634 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon76367   93   II: 14988471-14988563 Caenorhabditis elegans
Exon76368   99   II: 14988618-14988716 Caenorhabditis elegans
Exon76369   253   II: 14991077-14991329 Caenorhabditis elegans
Exon76370   381   II: 14992254-14992634 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y53F4B.43.1 14988471 14992634 1

1 Sequence

Length
826

1 Sequence Ontology Term

Identifier Name Description
transcript