WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y53F4B.9.1 Sequence Name  Y53F4B.9.1
Length (nt)  3672   Chromosome Location  II: 15004864-15010416
Chromosome . Primary Identifier  II Chromosome Location . Start  15004864
Chromosome Location . End  15010416 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y53F4B.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013156 Y53F4B.9 Y53F4B.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y53F4B.9 Y53F4B.9 3507   II: 15005024-15005599

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y53F4B.9.1 15004864 15010416 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon76379   736   II: 15004864-15005599 Caenorhabditis elegans
Exon76380   435   II: 15005943-15006377 Caenorhabditis elegans
Exon76381   738   II: 15007093-15007830 Caenorhabditis elegans
Exon76382   1095   II: 15008031-15009125 Caenorhabditis elegans
Exon76383   114   II: 15009179-15009292 Caenorhabditis elegans
Exon76384   249   II: 15009639-15009887 Caenorhabditis elegans
Exon76385   199   II: 15010067-15010265 Caenorhabditis elegans
Exon76386   106   II: 15010311-15010416 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y53F4B.9.1 15004864 15010416 -1

1 Sequence

Length
3672

1 Sequence Ontology Term

Identifier Name Description
transcript