WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y53F4B.12a.1 Sequence Name  Y53F4B.12a.1
Length (nt)  2254   Chromosome Location  II: 15019223-15025782
Chromosome . Primary Identifier  II Chromosome Location . Start  15019223
Chromosome Location . End  15025782 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y53F4B.12a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013159 Y53F4B.12 Y53F4B.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y53F4B.12a Y53F4B.12a 2166   II: 15019224-15019452

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y53F4B.12a.1 15019223 15025782 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon76399   230   II: 15019223-15019452 Caenorhabditis elegans
Exon76401   167   II: 15019522-15019688 Caenorhabditis elegans
Exon76403   279   II: 15020379-15020657 Caenorhabditis elegans
Exon76405   164   II: 15020700-15020863 Caenorhabditis elegans
Exon76407   81   II: 15021652-15021732 Caenorhabditis elegans
Exon76410   95   II: 15022410-15022504 Caenorhabditis elegans
Exon76412   155   II: 15022655-15022809 Caenorhabditis elegans
Exon76414   273   II: 15023217-15023489 Caenorhabditis elegans
Exon76416   151   II: 15023530-15023680 Caenorhabditis elegans
Exon76418   298   II: 15024355-15024652 Caenorhabditis elegans
Exon76420   125   II: 15025375-15025499 Caenorhabditis elegans
Exon76423   236   II: 15025547-15025782 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y53F4B.12a.1 15019223 15025782 1

1 Sequence

Length
2254

1 Sequence Ontology Term

Identifier Name Description
transcript