WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y53F4B.12b.1 Sequence Name  Y53F4B.12b.1
Length (nt)  2289   Chromosome Location  II: 15019224-15025695
Chromosome . Primary Identifier  II Chromosome Location . Start  15019224
Chromosome Location . End  15025695 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y53F4B.12b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013159 Y53F4B.12 Y53F4B.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y53F4B.12b Y53F4B.12b 2289   II: 15019224-15019452

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y53F4B.12b.1 15019224 15025695 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon76400   229   II: 15019224-15019452 Caenorhabditis elegans
Exon76402   167   II: 15019522-15019688 Caenorhabditis elegans
Exon76404   279   II: 15020379-15020657 Caenorhabditis elegans
Exon76406   164   II: 15020700-15020863 Caenorhabditis elegans
Exon76408   81   II: 15021652-15021732 Caenorhabditis elegans
Exon76409   123   II: 15021932-15022054 Caenorhabditis elegans
Exon76411   95   II: 15022410-15022504 Caenorhabditis elegans
Exon76413   155   II: 15022655-15022809 Caenorhabditis elegans
Exon76415   273   II: 15023217-15023489 Caenorhabditis elegans
Exon76417   151   II: 15023530-15023680 Caenorhabditis elegans
Exon76419   298   II: 15024355-15024652 Caenorhabditis elegans
Exon76421   125   II: 15025375-15025499 Caenorhabditis elegans
Exon76422   149   II: 15025547-15025695 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y53F4B.12b.1 15019224 15025695 1

1 Sequence

Length
2289

1 Sequence Ontology Term

Identifier Name Description
transcript