WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y53F4B.15.1 Sequence Name  Y53F4B.15.1
Length (nt)  1339   Chromosome Location  II: 15039404-15048904
Chromosome . Primary Identifier  II Chromosome Location . Start  15039404
Chromosome Location . End  15048904 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y53F4B.15.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000208 trip-4 Y53F4B.15 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y53F4B.15 Y53F4B.15 1278   II: 15039416-15039515

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y53F4B.15.1 15039404 15048904 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon76461   112   II: 15039404-15039515 Caenorhabditis elegans
Exon76462   547   II: 15040253-15040799 Caenorhabditis elegans
Exon76463   85   II: 15042387-15042471 Caenorhabditis elegans
Exon76465   289   II: 15047106-15047394 Caenorhabditis elegans
Exon76466   306   II: 15048599-15048904 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y53F4B.15.1 15039404 15048904 1

1 Sequence

Length
1339

1 Sequence Ontology Term

Identifier Name Description
transcript