WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y53F4B.19.1 Sequence Name  Y53F4B.19.1
Length (nt)  1390   Chromosome Location  II: 15076934-15079475
Chromosome . Primary Identifier  II Chromosome Location . Start  15076934
Chromosome Location . End  15079475 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y53F4B.19.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013165 Y53F4B.19 Y53F4B.19 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y53F4B.19 Y53F4B.19 1017   II: 15077273-15077464

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y53F4B.19.1 15076934 15079475 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon76479   531   II: 15076934-15077464 Caenorhabditis elegans
Exon76480   168   II: 15077517-15077684 Caenorhabditis elegans
Exon76481   87   II: 15077731-15077817 Caenorhabditis elegans
Exon76482   78   II: 15078265-15078342 Caenorhabditis elegans
Exon76483   156   II: 15078394-15078549 Caenorhabditis elegans
Exon76484   370   II: 15079106-15079475 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y53F4B.19.1 15076934 15079475 1

1 Sequence

Length
1390

1 Sequence Ontology Term

Identifier Name Description
transcript