WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y53F4B.22b.1 Sequence Name  Y53F4B.22b.1
Length (nt)  582   Chromosome Location  II: 15121693-15123063
Chromosome . Primary Identifier  II Chromosome Location . Start  15121693
Chromosome Location . End  15123063 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y53F4B.22b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013168 arp-1 Y53F4B.22 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y53F4B.22b Y53F4B.22b 582   II: 15121693-15121857

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y53F4B.22b.1 15121693 15123063 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon76533   165   II: 15121693-15121857 Caenorhabditis elegans
Exon76535   138   II: 15121908-15122045 Caenorhabditis elegans
Exon76536   279   II: 15122785-15123063 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y53F4B.22b.1 15121693 15123063 1

1 Sequence

Length
582

1 Sequence Ontology Term

Identifier Name Description
transcript