WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y53F4B.23.1 Sequence Name  Y53F4B.23.1
Length (nt)  788   Chromosome Location  II: 15124504-15126365
Chromosome . Primary Identifier  II Chromosome Location . Start  15124504
Chromosome Location . End  15126365 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y53F4B.23.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013169 Y53F4B.23 Y53F4B.23 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y53F4B.23 Y53F4B.23 621   II: 15124563-15124645

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y53F4B.23.1 15124504 15126365 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon76538   142   II: 15124504-15124645 Caenorhabditis elegans
Exon76539   166   II: 15125622-15125787 Caenorhabditis elegans
Exon76540   188   II: 15125839-15126026 Caenorhabditis elegans
Exon76541   292   II: 15126074-15126365 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y53F4B.23.1 15124504 15126365 1

1 Sequence

Length
788

1 Sequence Ontology Term

Identifier Name Description
transcript