WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y53F4B.62a.1 Sequence Name  Y53F4B.62a.1
Length (nt)  1051   Chromosome Location  II: 15129386-15130612
Chromosome . Primary Identifier  II Chromosome Location . Start  15129386
Chromosome Location . End  15130612 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y53F4B.62a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00219491 Y53F4B.62 Y53F4B.62 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y53F4B.62a Y53F4B.62a 996   II: 15129407-15129539

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y53F4B.62a.1 15129386 15130612 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon76548   154   II: 15129386-15129539 Caenorhabditis elegans
Exon76549   762   II: 15129666-15130427 Caenorhabditis elegans
Exon76551   135   II: 15130478-15130612 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y53F4B.62a.1 15129386 15130612 -1

1 Sequence

Length
1051

1 Sequence Ontology Term

Identifier Name Description
transcript