WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y53F4B.28 Sequence Name  Y53F4B.28
Length (nt)  2583   Chromosome Location  II: 15158183-15158251
Chromosome . Primary Identifier  II Chromosome Location . Start  15158183
Chromosome Location . End  15158251
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y53F4B.28

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE24422 PTR-20 97.3 860 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00057281
WBRNAi00076960
WBRNAi00076928
WBRNAi00076937
WBRNAi00037421
WBRNAi00076969

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y53F4B.28 15158183 15158251 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004234 ptr-20 Y53F4B.28 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y53F4B.28 15158183 15158251 1
CDS:Y53F4B.28 15158686 15158847 1
CDS:Y53F4B.28 15158893 15158973 1
CDS:Y53F4B.28 15159073 15159482 1
CDS:Y53F4B.28 15159608 15159719 1
CDS:Y53F4B.28 15160002 15160168 1
CDS:Y53F4B.28 15160227 15160306 1
CDS:Y53F4B.28 15160358 15160722 1
CDS:Y53F4B.28 15161149 15161421 1
CDS:Y53F4B.28 15161867 15162185 1
CDS:Y53F4B.28 15162262 15162497 1
CDS:Y53F4B.28 15163164 15163472 1

1 Sequence

Length
2583

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y53F4B.28.1 Y53F4B.28.1 2728   II: 15158180-15163614