WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y53F4B.33.1 Sequence Name  Y53F4B.33.1
Length (nt)  702   Chromosome Location  II: 15171163-15171916
Chromosome . Primary Identifier  II Chromosome Location . Start  15171163
Chromosome Location . End  15171916 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y53F4B.33.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001787 gst-39 Y53F4B.33 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y53F4B.33 Y53F4B.33 630   II: 15171229-15171719

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y53F4B.33.1 15171163 15171916 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon76639   557   II: 15171163-15171719 Caenorhabditis elegans
Exon76640   145   II: 15171772-15171916 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y53F4B.33.1 15171163 15171916 -1

1 Sequence

Length
702

1 Sequence Ontology Term

Identifier Name Description
transcript