WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y46E12BL.2a.2 Sequence Name  Y46E12BL.2a.2
Length (nt)  4262   Chromosome Location  II: 15232947-15244933
Chromosome . Primary Identifier  II Chromosome Location . Start  15232947
Chromosome Location . End  15244933 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y46E12BL.2a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021595 Y46E12BL.2 Y46E12BL.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y46E12BL.2a Y46E12BL.2a 4005   II: 15233162-15233229

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y46E12BL.2a.2 15232947 15244933 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon76718   73   II: 15232947-15233019 Caenorhabditis elegans
Exon76719   77   II: 15233153-15233229 Caenorhabditis elegans
Exon76723   270   II: 15233295-15233564 Caenorhabditis elegans
Exon76726   74   II: 15234487-15234560 Caenorhabditis elegans
Exon76728   164   II: 15234610-15234773 Caenorhabditis elegans
Exon76731   307   II: 15235634-15235940 Caenorhabditis elegans
Exon76734   677   II: 15237101-15237777 Caenorhabditis elegans
Exon76737   933   II: 15239550-15240482 Caenorhabditis elegans
Exon76740   1301   II: 15241774-15243074 Caenorhabditis elegans
Exon76745   386   II: 15244548-15244933 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y46E12BL.2a.2 15232947 15244933 1

1 Sequence

Length
4262

1 Sequence Ontology Term

Identifier Name Description
transcript