WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:2RSSE.1b.1 Sequence Name  2RSSE.1b.1
Length (nt)  2301   Chromosome Location  II: 15268210-15276282
Chromosome . Primary Identifier  II Chromosome Location . Start  15268210
Chromosome Location . End  15276282 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
2RSSE.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007064 rga-9 2RSSE.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:2RSSE.1b 2RSSE.1b 1437   II: 15268481-15268554

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:2RSSE.1b.1 15268210 15276282 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon76764   345   II: 15268210-15268554 Caenorhabditis elegans
Exon76768   336   II: 15269459-15269794 Caenorhabditis elegans
Exon76771   172   II: 15269860-15270031 Caenorhabditis elegans
Exon76774   178   II: 15270796-15270973 Caenorhabditis elegans
Exon76778   137   II: 15274380-15274516 Caenorhabditis elegans
Exon76779   276   II: 15275029-15275304 Caenorhabditis elegans
Exon76780   108   II: 15275352-15275459 Caenorhabditis elegans
Exon76781   749   II: 15275534-15276282 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:2RSSE.1b.1 15268210 15276282 1

1 Sequence

Length
2301

1 Sequence Ontology Term

Identifier Name Description
transcript