WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:cTel54X.1.1 Sequence Name  cTel54X.1.1
Length (nt)  1264   Chromosome Location  III: 1219-3097
Chromosome . Primary Identifier  III Chromosome Location . Start  1219
Chromosome Location . End  3097 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
cTel54X.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008352 fbxa-6 cTel54X.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:cTel54X.1 cTel54X.1 1032   III: 1271-1507

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:cTel54X.1.1 1219 3097 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon76787   289   III: 1219-1507 Caenorhabditis elegans
Exon76788   610   III: 1558-2167 Caenorhabditis elegans
Exon76789   84   III: 2681-2764 Caenorhabditis elegans
Exon76790   281   III: 2817-3097 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:cTel54X.1.1 1219 3097 -1

1 Sequence

Length
1264

1 Sequence Ontology Term

Identifier Name Description
transcript