WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W05G11.6.1 Sequence Name  W05G11.6.1
Length (nt)  2061   Chromosome Location  III: 62888-66260
Chromosome . Primary Identifier  III Chromosome Location . Start  62888
Chromosome Location . End  66260 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W05G11.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021043 pck-1 W05G11.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W05G11.6 W05G11.6 1956   III: 62989-63207

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W05G11.6.1 62888 66260 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon76869   320   III: 62888-63207 Caenorhabditis elegans
Exon76870   885   III: 63343-64227 Caenorhabditis elegans
Exon76871   188   III: 64798-64985 Caenorhabditis elegans
Exon76872   389   III: 65032-65420 Caenorhabditis elegans
Exon76873   279   III: 65982-66260 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W05G11.6.1 62888 66260 -1

1 Sequence

Length
2061

1 Sequence Ontology Term

Identifier Name Description
transcript