WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F54C4.1 Sequence Name  F54C4.1
Length (nt)  570   Chromosome Location  III: 87564-87686
Chromosome . Primary Identifier  III Chromosome Location . Start  87564
Chromosome Location . End  87686
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54C4.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE19890 MRPL-40 21.7 189 Caenorhabditis elegans
 

Other

22 RNAi

WormBase ID
WBRNAi00048252
WBRNAi00072521
WBRNAi00074415
WBRNAi00074416
WBRNAi00072523
WBRNAi00072522
WBRNAi00090950
WBRNAi00006683
WBRNAi00032750
WBRNAi00074417
WBRNAi00074419
WBRNAi00074418
WBRNAi00074421
WBRNAi00074420
WBRNAi00074422
WBRNAi00025613
WBRNAi00008841
WBRNAi00108627
WBRNAi00108552
WBRNAi00108702
WBRNAi00108713
WBRNAi00108724

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F54C4.1 87564 87686 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018793 mrpl-40 F54C4.1 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:F54C4.1 87564 87686 1
CDS:F54C4.1 87765 87895 1
CDS:F54C4.1 87939 88005 1
CDS:F54C4.1 88048 88212 1
CDS:F54C4.1 89069 89152 1

1 Sequence

Length
570

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F54C4.1.1 F54C4.1.1 666   III: 87559-89243