WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C29F9.4.1 Sequence Name  C29F9.4.1
Length (nt)  1012   Chromosome Location  III: 120435-124690
Chromosome . Primary Identifier  III Chromosome Location . Start  120435
Chromosome Location . End  124690 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C29F9.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016219 pals-24 C29F9.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C29F9.4 C29F9.4 906   III: 120492-120516

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C29F9.4.1 120435 124690 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon76949   82   III: 120435-120516 Caenorhabditis elegans
Exon76950   32   III: 120561-120592 Caenorhabditis elegans
Exon76951   62   III: 120637-120698 Caenorhabditis elegans
Exon76952   31   III: 120745-120775 Caenorhabditis elegans
Exon76953   51   III: 121157-121207 Caenorhabditis elegans
Exon76957   78   III: 122681-122758 Caenorhabditis elegans
Exon76958   54   III: 123174-123227 Caenorhabditis elegans
Exon76959   78   III: 123970-124047 Caenorhabditis elegans
Exon76960   174   III: 124096-124269 Caenorhabditis elegans
Exon76961   370   III: 124321-124690 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C29F9.4.1 120435 124690 1

1 Sequence

Length
1012

1 Sequence Ontology Term

Identifier Name Description
transcript