WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C29F9.3a.1 Sequence Name  C29F9.3a.1
Length (nt)  1323   Chromosome Location  III: 124778-127971
Chromosome . Primary Identifier  III Chromosome Location . Start  124778
Chromosome Location . End  127971 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C29F9.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016218 pals-23 C29F9.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C29F9.3a C29F9.3a 912   III: 124805-124885

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C29F9.3a.1 124778 127971 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon76962   108   III: 124778-124885 Caenorhabditis elegans
Exon76967   129   III: 124933-125061 Caenorhabditis elegans
Exon76972   288   III: 125622-125909 Caenorhabditis elegans
Exon76975   168   III: 125956-126123 Caenorhabditis elegans
Exon76980   462   III: 126174-126635 Caenorhabditis elegans
Exon76982   92   III: 127760-127851 Caenorhabditis elegans
Exon76984   76   III: 127896-127971 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C29F9.3a.1 124778 127971 1

1 Sequence

Length
1323

1 Sequence Ontology Term

Identifier Name Description
transcript