WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C29F9.13.1 Sequence Name  C29F9.13.1
Length (nt)  466   Chromosome Location  III: 130146-130750
Chromosome . Primary Identifier  III Chromosome Location . Start  130146
Chromosome Location . End  130750 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C29F9.13.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016227 nhr-280 C29F9.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C29F9.13 C29F9.13 432   III: 130180-130430

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C29F9.13.1 130146 130750 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon76986   285   III: 130146-130430 Caenorhabditis elegans
Exon76987   164   III: 130477-130640 Caenorhabditis elegans
Exon76988   17   III: 130734-130750 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C29F9.13.1 130146 130750 -1

1 Sequence

Length
466

1 Sequence Ontology Term

Identifier Name Description
transcript