WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T17A3.2 Sequence Name  T17A3.2
Length (nt)  918   Chromosome Location  III: 134499-134576
Chromosome . Primary Identifier  III Chromosome Location . Start  134499
Chromosome Location . End  134576
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T17A3.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE37151 PALS-25 34.7 305 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00053448
WBRNAi00006589
WBRNAi00117228

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T17A3.2 134499 134576 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020540 pals-25 T17A3.2 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:T17A3.2 134499 134576 1
CDS:T17A3.2 136101 136247 1
CDS:T17A3.2 136301 136597 1
CDS:T17A3.2 136646 136813 1
CDS:T17A3.2 137598 137825 1

1 Sequence

Length
918

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T17A3.2.1 T17A3.2.1 1073   III: 134494-137975