WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T17A3.13.1 Sequence Name  T17A3.13.1
Length (nt)  606   Chromosome Location  III: 146969-147620
Chromosome . Primary Identifier  III Chromosome Location . Start  146969
Chromosome Location . End  147620 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T17A3.13.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00269434 sqst-5 T17A3.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T17A3.13 T17A3.13 579   III: 146983-147314

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T17A3.13.1 146969 147620 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon77017   346   III: 146969-147314 Caenorhabditis elegans
Exon77018   260   III: 147361-147620 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T17A3.13.1 146969 147620 -1

1 Sequence

Length
606

1 Sequence Ontology Term

Identifier Name Description
transcript