WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F40G9.9.1 Sequence Name  F40G9.9.1
Length (nt)  1240   Chromosome Location  III: 170319-171717
Chromosome . Primary Identifier  III Chromosome Location . Start  170319
Chromosome Location . End  171717 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F40G9.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018245 F40G9.9 F40G9.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F40G9.9 F40G9.9 1182   III: 170370-170505

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F40G9.9.1 170319 171717 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon77066   187   III: 170319-170505 Caenorhabditis elegans
Exon77067   594   III: 170557-171150 Caenorhabditis elegans
Exon77068   309   III: 171213-171521 Caenorhabditis elegans
Exon77069   150   III: 171568-171717 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F40G9.9.1 170319 171717 -1

1 Sequence

Length
1240

1 Sequence Ontology Term

Identifier Name Description
transcript