WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F40G9.10.1 Sequence Name  F40G9.10.1
Length (nt)  567   Chromosome Location  III: 174609-175833
Chromosome . Primary Identifier  III Chromosome Location . Start  174609
Chromosome Location . End  175833 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F40G9.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018246 clec-148 F40G9.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F40G9.10 F40G9.10 567   III: 174609-174716

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F40G9.10.1 174609 175833 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon77077   108   III: 174609-174716 Caenorhabditis elegans
Exon77078   120   III: 174769-174888 Caenorhabditis elegans
Exon77079   44   III: 174939-174982 Caenorhabditis elegans
Exon77080   106   III: 175497-175602 Caenorhabditis elegans
Exon77081   189   III: 175645-175833 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F40G9.10.1 174609 175833 -1

1 Sequence

Length
567

1 Sequence Ontology Term

Identifier Name Description
transcript