WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F40G9.11.1 Sequence Name  F40G9.11.1
Length (nt)  698   Chromosome Location  III: 186949-188131
Chromosome . Primary Identifier  III Chromosome Location . Start  186949
Chromosome Location . End  188131 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F40G9.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003510 mxl-2 F40G9.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F40G9.11 F40G9.11 618   III: 187022-187195

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F40G9.11.1 186949 188131 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon77102   247   III: 186949-187195 Caenorhabditis elegans
Exon77103   166   III: 187250-187415 Caenorhabditis elegans
Exon77105   86   III: 187794-187879 Caenorhabditis elegans
Exon77106   199   III: 187933-188131 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F40G9.11.1 186949 188131 -1

1 Sequence

Length
698

1 Sequence Ontology Term

Identifier Name Description
transcript