WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F40G9.17.1 Sequence Name  F40G9.17.1
Length (nt)  1710   Chromosome Location  III: 194462-201211
Chromosome . Primary Identifier  III Chromosome Location . Start  194462
Chromosome Location . End  201211 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F40G9.17.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00185078 F40G9.17 F40G9.17 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F40G9.17 F40G9.17 723   III: 194462-194551

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F40G9.17.1 194462 201211 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon77122   90   III: 194462-194551 Caenorhabditis elegans
Exon77123   156   III: 195292-195447 Caenorhabditis elegans
Exon77125   150   III: 197108-197257 Caenorhabditis elegans
Exon77127   173   III: 197864-198036 Caenorhabditis elegans
Exon77130   1141   III: 200071-201211 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F40G9.17.1 194462 201211 1

1 Sequence

Length
1710

1 Sequence Ontology Term

Identifier Name Description
transcript