WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y50D7A.3a Sequence Name  Y50D7A.3a
Length (nt)  1281   Chromosome Location  III: 254559-254663
Chromosome . Primary Identifier  III Chromosome Location . Start  254559
Chromosome Location . End  254663
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y50D7A.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE54109 Y50D7A.3, isoform a 49.4 426 Caenorhabditis elegans
 

Other

14 RNAi

WormBase ID
WBRNAi00095797
WBRNAi00057085
WBRNAi00057086
WBRNAi00037325
WBRNAi00095913
WBRNAi00095990
WBRNAi00096065
WBRNAi00096142
WBRNAi00096219
WBRNAi00096296
WBRNAi00096394
WBRNAi00096477
WBRNAi00096560
WBRNAi00096659

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y50D7A.3a 254559 254663 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021753 Y50D7A.3 Y50D7A.3 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y50D7A.3a 254559 254663 1
CDS:Y50D7A.3a 256097 256283 1
CDS:Y50D7A.3a 257461 257654 1
CDS:Y50D7A.3a 259275 259519 1
CDS:Y50D7A.3a 261125 261389 1
CDS:Y50D7A.3a 263056 263160 1
CDS:Y50D7A.3a 263780 263959 1

1 Sequence

Length
1281

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y50D7A.3a.1 Y50D7A.3a.1 2238   III: 254535-264892