WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y50D7A.9.1 Sequence Name  Y50D7A.9.1
Length (nt)  1095   Chromosome Location  III: 284117-289438
Chromosome . Primary Identifier  III Chromosome Location . Start  284117
Chromosome Location . End  289438 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y50D7A.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021757 taco-1 Y50D7A.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y50D7A.9 Y50D7A.9 858   III: 284117-284326

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y50D7A.9.1 284117 289438 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon77245   210   III: 284117-284326 Caenorhabditis elegans
Exon77246   129   III: 284979-285107 Caenorhabditis elegans
Exon77247   234   III: 285265-285498 Caenorhabditis elegans
Exon77248   234   III: 287409-287642 Caenorhabditis elegans
Exon77249   288   III: 289151-289438 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y50D7A.9.1 284117 289438 1

1 Sequence

Length
1095

1 Sequence Ontology Term

Identifier Name Description
transcript