WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y50D7A.13a.1 Sequence Name  Y50D7A.13a.1
Length (nt)  690   Chromosome Location  III: 289464-294627
Chromosome . Primary Identifier  III Chromosome Location . Start  289464
Chromosome Location . End  294627 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y50D7A.13a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00194737 Y50D7A.13 Y50D7A.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y50D7A.13a Y50D7A.13a 585   III: 289464-289539

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y50D7A.13a.1 289464 294627 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon77251   76   III: 289464-289539 Caenorhabditis elegans
Exon77253   80   III: 292326-292405 Caenorhabditis elegans
Exon77254   141   III: 292465-292605 Caenorhabditis elegans
Exon77256   133   III: 293924-294056 Caenorhabditis elegans
Exon77257   97   III: 294107-294203 Caenorhabditis elegans
Exon77258   163   III: 294465-294627 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y50D7A.13a.1 289464 294627 -1

1 Sequence

Length
690

1 Sequence Ontology Term

Identifier Name Description
transcript