WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y50D7A.10.1 Sequence Name  Y50D7A.10.1
Length (nt)  516   Chromosome Location  III: 315460-321716
Chromosome . Primary Identifier  III Chromosome Location . Start  315460
Chromosome Location . End  321716 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y50D7A.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021758 Y50D7A.10 Y50D7A.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y50D7A.10 Y50D7A.10 417   III: 315462-315561

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y50D7A.10.1 315460 321716 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon77284   102   III: 315460-315561 Caenorhabditis elegans
Exon77285   183   III: 316936-317118 Caenorhabditis elegans
Exon77286   74   III: 321431-321504 Caenorhabditis elegans
Exon77287   157   III: 321560-321716 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y50D7A.10.1 315460 321716 1

1 Sequence

Length
516

1 Sequence Ontology Term

Identifier Name Description
transcript