WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W07B3.2c.1 Sequence Name  W07B3.2c.1
Length (nt)  2290   Chromosome Location  III: 344307-348429
Chromosome . Primary Identifier  III Chromosome Location . Start  344307
Chromosome Location . End  348429 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W07B3.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001561 gei-4 W07B3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W07B3.2c W07B3.2c 1629   III: 344939-345082

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W07B3.2c.1 344307 348429 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon77310   776   III: 344307-345082 Caenorhabditis elegans
Exon77317   393   III: 345466-345858 Caenorhabditis elegans
Exon77331   220   III: 346289-346508 Caenorhabditis elegans
Exon77340   101   III: 346768-346868 Caenorhabditis elegans
Exon77349   399   III: 347039-347437 Caenorhabditis elegans
Exon77357   69   III: 347841-347909 Caenorhabditis elegans
Exon77366   120   III: 348045-348164 Caenorhabditis elegans
Exon77379   212   III: 348218-348429 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W07B3.2c.1 344307 348429 -1

1 Sequence

Length
2290

1 Sequence Ontology Term

Identifier Name Description
transcript