WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K10F12.3a.1 Sequence Name  K10F12.3a.1
Length (nt)  3352   Chromosome Location  III: 367326-377570
Chromosome . Primary Identifier  III Chromosome Location . Start  367326
Chromosome Location . End  377570 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K10F12.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004045 pll-1 K10F12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K10F12.3a K10F12.3a 3228   III: 367338-367438

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K10F12.3a.1 367326 377570 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon77389   113   III: 367326-367438 Caenorhabditis elegans
Exon77390   122   III: 368532-368653 Caenorhabditis elegans
Exon77392   150   III: 368703-368852 Caenorhabditis elegans
Exon77394   86   III: 369185-369270 Caenorhabditis elegans
Exon77396   121   III: 369316-369436 Caenorhabditis elegans
Exon77398   176   III: 369485-369660 Caenorhabditis elegans
Exon77400   177   III: 369706-369882 Caenorhabditis elegans
Exon77402   174   III: 370386-370559 Caenorhabditis elegans
Exon77404   121   III: 370645-370765 Caenorhabditis elegans
Exon77406   314   III: 370811-371124 Caenorhabditis elegans
Exon77408   92   III: 371915-372006 Caenorhabditis elegans
Exon77410   98   III: 372052-372149 Caenorhabditis elegans
Exon77412   227   III: 372198-372424 Caenorhabditis elegans
Exon77414   259   III: 372504-372762 Caenorhabditis elegans
Exon77416   344   III: 372818-373161 Caenorhabditis elegans
Exon77418   157   III: 373522-373678 Caenorhabditis elegans
Exon77420   83   III: 373735-373817 Caenorhabditis elegans
Exon77423   123   III: 376448-376570 Caenorhabditis elegans
Exon77425   189   III: 376952-377140 Caenorhabditis elegans
Exon77428   226   III: 377345-377570 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K10F12.3a.1 367326 377570 1

1 Sequence

Length
3352

1 Sequence Ontology Term

Identifier Name Description
transcript