WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y55B1BR.6g.1 Sequence Name  Y55B1BR.6g.1
Length (nt)  755   Chromosome Location  III: 453573-459701
Chromosome . Primary Identifier  III Chromosome Location . Start  453573
Chromosome Location . End  459701 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55B1BR.6g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044401 Y55B1BR.6 Y55B1BR.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y55B1BR.6g Y55B1BR.6g 384   III: 453822-454010

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y55B1BR.6g.1 453573 459701 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon77532   438   III: 453573-454010 Caenorhabditis elegans
Exon77545   120   III: 454272-454391 Caenorhabditis elegans
Exon77549   97   III: 455045-455141 Caenorhabditis elegans
Exon77558   100   III: 459602-459701 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y55B1BR.6g.1 453573 459701 -1

1 Sequence

Length
755

1 Sequence Ontology Term

Identifier Name Description
transcript