WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F30H5.3.1 Sequence Name  F30H5.3.1
Length (nt)  5362   Chromosome Location  III: 505241-512217
Chromosome . Primary Identifier  III Chromosome Location . Start  505241
Chromosome Location . End  512217 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F30H5.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017937 F30H5.3 F30H5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F30H5.3 F30H5.3 4800   III: 505503-505657

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F30H5.3.1 505241 512217 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon77609   417   III: 505241-505657 Caenorhabditis elegans
Exon77610   2967   III: 505713-508679 Caenorhabditis elegans
Exon77611   76   III: 508801-508876 Caenorhabditis elegans
Exon77612   952   III: 508959-509910 Caenorhabditis elegans
Exon77613   278   III: 510060-510337 Caenorhabditis elegans
Exon77614   117   III: 510386-510502 Caenorhabditis elegans
Exon77615   79   III: 510556-510634 Caenorhabditis elegans
Exon77616   142   III: 510692-510833 Caenorhabditis elegans
Exon77618   334   III: 511884-512217 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F30H5.3.1 505241 512217 -1

1 Sequence

Length
5362

1 Sequence Ontology Term

Identifier Name Description
transcript