WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F30H5.1.1 Sequence Name  F30H5.1.1
Length (nt)  3450   Chromosome Location  III: 491547-502625
Chromosome . Primary Identifier  III Chromosome Location . Start  491547
Chromosome Location . End  502625 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F30H5.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006781 unc-45 F30H5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F30H5.1 F30H5.1 2886   III: 491549-491637

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F30H5.1.1 491547 502625 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon77632   91   III: 491547-491637 Caenorhabditis elegans
Exon77633   128   III: 491689-491816 Caenorhabditis elegans
Exon77634   127   III: 491863-491989 Caenorhabditis elegans
Exon77637   79   III: 493569-493647 Caenorhabditis elegans
Exon77638   129   III: 493717-493845 Caenorhabditis elegans
Exon77639   641   III: 494355-494995 Caenorhabditis elegans
Exon77640   298   III: 496271-496568 Caenorhabditis elegans
Exon77641   685   III: 497437-498121 Caenorhabditis elegans
Exon77642   266   III: 499272-499537 Caenorhabditis elegans
Exon77643   163   III: 500462-500624 Caenorhabditis elegans
Exon77644   843   III: 501783-502625 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F30H5.1.1 491547 502625 1

1 Sequence

Length
3450

1 Sequence Ontology Term

Identifier Name Description
transcript