WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T22F7.1.1 Sequence Name  T22F7.1.1
Length (nt)  1757   Chromosome Location  III: 542066-546537
Chromosome . Primary Identifier  III Chromosome Location . Start  542066
Chromosome Location . End  546537 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T22F7.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020701 T22F7.1 T22F7.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T22F7.1 T22F7.1 1533   III: 542127-542329

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T22F7.1.1 542066 546537 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon77645   264   III: 542066-542329 Caenorhabditis elegans
Exon77646   255   III: 542890-543144 Caenorhabditis elegans
Exon77647   127   III: 543197-543323 Caenorhabditis elegans
Exon77648   200   III: 543880-544079 Caenorhabditis elegans
Exon77649   393   III: 544722-545114 Caenorhabditis elegans
Exon77650   518   III: 546020-546537 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T22F7.1.1 542066 546537 1

1 Sequence

Length
1757

1 Sequence Ontology Term

Identifier Name Description
transcript