WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T19C3.3.1 Sequence Name  T19C3.3.1
Length (nt)  425   Chromosome Location  III: 610881-614547
Chromosome . Primary Identifier  III Chromosome Location . Start  610881
Chromosome Location . End  614547 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T19C3.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020561 T19C3.3 T19C3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T19C3.3 T19C3.3 279   III: 611006-611067

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T19C3.3.1 610881 614547 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon77808   187   III: 610881-611067 Caenorhabditis elegans
Exon77810   151   III: 611350-611500 Caenorhabditis elegans
Exon77811   87   III: 614461-614547 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T19C3.3.1 610881 614547 -1

1 Sequence

Length
425

1 Sequence Ontology Term

Identifier Name Description
transcript