WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T19C3.2.1 Sequence Name  T19C3.2.1
Length (nt)  920   Chromosome Location  III: 615422-617567
Chromosome . Primary Identifier  III Chromosome Location . Start  615422
Chromosome Location . End  617567 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T19C3.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020560 T19C3.2 T19C3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T19C3.2 T19C3.2 657   III: 615525-615621

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T19C3.2.1 615422 617567 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon77812   200   III: 615422-615621 Caenorhabditis elegans
Exon77813   201   III: 615806-616006 Caenorhabditis elegans
Exon77814   104   III: 616360-616463 Caenorhabditis elegans
Exon77815   94   III: 616624-616717 Caenorhabditis elegans
Exon77816   103   III: 617204-617306 Caenorhabditis elegans
Exon77817   218   III: 617350-617567 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T19C3.2.1 615422 617567 -1

1 Sequence

Length
920

1 Sequence Ontology Term

Identifier Name Description
transcript