WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T19C3.8.1 Sequence Name  T19C3.8.1
Length (nt)  1794   Chromosome Location  III: 632019-634626
Chromosome . Primary Identifier  III Chromosome Location . Start  632019
Chromosome Location . End  634626 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T19C3.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001412 fem-2 T19C3.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T19C3.8 T19C3.8 1350   III: 632409-632572

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T19C3.8.1 632019 634626 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon77836   554   III: 632019-632572 Caenorhabditis elegans
Exon77837   610   III: 632872-633481 Caenorhabditis elegans
Exon77838   197   III: 633532-633728 Caenorhabditis elegans
Exon77839   340   III: 634140-634479 Caenorhabditis elegans
Exon77840   93   III: 634534-634626 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T19C3.8.1 632019 634626 -1

1 Sequence

Length
1794

1 Sequence Ontology Term

Identifier Name Description
transcript