WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T19C3.5.1 Sequence Name  T19C3.5.1
Length (nt)  1746   Chromosome Location  III: 624578-627938
Chromosome . Primary Identifier  III Chromosome Location . Start  624578
Chromosome Location . End  627938 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T19C3.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020563 T19C3.5 T19C3.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T19C3.5 T19C3.5 1473   III: 624690-624864

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T19C3.5.1 624578 627938 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon77861   287   III: 624578-624864 Caenorhabditis elegans
Exon77862   140   III: 625001-625140 Caenorhabditis elegans
Exon77863   338   III: 625607-625944 Caenorhabditis elegans
Exon77864   83   III: 626384-626466 Caenorhabditis elegans
Exon77865   216   III: 626561-626776 Caenorhabditis elegans
Exon77866   137   III: 626879-627015 Caenorhabditis elegans
Exon77867   103   III: 627065-627167 Caenorhabditis elegans
Exon77868   119   III: 627247-627365 Caenorhabditis elegans
Exon77869   323   III: 627616-627938 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T19C3.5.1 624578 627938 -1

1 Sequence

Length
1746

1 Sequence Ontology Term

Identifier Name Description
transcript