WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C09F5.1a Sequence Name  C09F5.1a
Length (nt)  1713   Chromosome Location  III: 658726-658948
Chromosome . Primary Identifier  III Chromosome Location . Start  658726
Chromosome Location . End  658948
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09F5.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE44860 C09F5.1, isoform a 64.9 570 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00040206
WBRNAi00028728
WBRNAi00010524
WBRNAi00006530
WBRNAi00103172

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C09F5.1a 658726 658948 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015647 C09F5.1 C09F5.1 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:C09F5.1a 658726 658948 1
CDS:C09F5.1a 659238 659423 1
CDS:C09F5.1a 659522 659726 1
CDS:C09F5.1a 660447 660656 1
CDS:C09F5.1a 660859 661159 1
CDS:C09F5.1a 661243 661380 1
CDS:C09F5.1a 661756 661903 1
CDS:C09F5.1a 661968 662109 1
CDS:C09F5.1a 662354 662513 1

1 Sequence

Length
1713

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C09F5.1a.1 C09F5.1a.1 1949   III: 658709-662732